Evolution 进化 is a change in the heritable traits of a population over generations. Natural selection 自然选择 is its main driver: individuals vary, some variations are heritable, more offspring are produced than survive, and those with traits better suited to the environment survive and reproduce more. Over time, helpful traits become more common.
Natural selection: the best-adapted survive, reproduce, and pass on their alleles
Peppered moth dark form (carbonaria) — industrial melanism is a classic natural-selection case study
Selection acts on variation 变异. Fitness 适合度 means reproductive success, not strength. Selection comes in modes: directional (favors one extreme), stabilizing (favors the average), and disruptive (favors both extremes). The environment does the "selecting," so a trait that helps in one setting may not in another. Well-suited traits are adaptations 适应.
Stabilising, directional, and disruptive selection
In artificial selection 人工选择, humans – not nature – choose which individuals breed, selecting for desired traits (crops, livestock, dogs). It works the same way as natural selection and, being fast and visible, is strong evidence that selection can reshape populations.
Selective breeding makes a wanted feature more common over generations
iv. 奠基者效应是遗传漂变的一种类型,当一部分种群与其他成员分离而建立新种群时发生。该新奠基种群中的基因和性状频率将发生变化。
v. 迁移可能导致基因流(即从种群中添加或移除等位基因)。
学习目标 7.4.B: 描述随机过程在特定种群进化中的作用。
7.4.B.1 随机过程可能导致种群中等位基因频率的改变。
i. 突变产生遗传变异,为自然选择提供了作用的表型基础。
ii. 遗传漂变可使一个小种群与同一物种的其他种群发生分化。
iii. 两个种群之间的基因流动可防止它们分化为不同的物种。
学习目标 7.4.C: 描述种群基因组成随时间的变化。
7.4.C.1 等位基因频率的变化为种群中进化的发生提供了证据。
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Population genetics 群体遗传学 studies the pool of alleles in a population. Evolution is a change in allele frequencies 等位基因频率 over time. Besides natural selection, allele frequencies change through mutation (new alleles), gene flow 基因流 (migration), and genetic drift 遗传漂变 (random change, strongest in small populations – the bottleneck and founder effects).
The Hardy–Weinberg 哈迪-温伯格 model gives the allele and genotype frequencies expected when a population is not evolving. With allele frequencies $p$ and $q$ ($p+q=1$):
$$p^2 + 2pq + q^2 = 1,$$
where $p^2$ and $q^2$ are the homozygotes and $2pq$ the heterozygotes. It holds only under five conditions (no selection, no mutation, no migration, random mating, large population); when real data differ from the prediction, the population is evolving.
Worked example. In a population, $16\%$ of individuals show the recessive phenotype, so $q^2=0.16$ and $q=\sqrt{0.16}=0.4$. Then $p=1-q=0.6$. The predicted carrier frequency (heterozygotes) is $2pq=2(0.6)(0.4)=0.48$, i.e. $48\%$, and the homozygous dominants are $p^2=0.6^2=0.36$, i.e. $36\%$. As a check, $0.36+0.48+0.16=1$. This is the standard route: recessive phenotype $\to q^2\to q\to p\to$ everything else.
Hardy–Weinberg: allele frequencies p and q give genotype frequencies p², 2pq, q²
i. 化石可以通过多种方法进行年代测定。这些方法包括:1)发现化石的岩石层年龄;2)同位素(包括碳-14)的衰变速率;以及 3)地理数据。
ii. 形态学同源结构,包括退化器官,提供了共同祖先的证据。
7.6.B.2 DNA核苷酸序列与蛋白质氨基酸序列的比较为进化和共同祖先提供了证据。
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Archaeopteryx fossil: feathers plus reptilian features — evidence of common ancestry
Multiple independent lines support evolution: the fossil record 化石记录, homologous structures 同源结构 (shared anatomy from common ancestry), vestigial structures 痕迹器官, shared embryology, and molecular evidence – the near-universal genetic code and matching DNA/protein sequences.
All life shares a common ancestor 共同祖先, shown by universal features: the same DNA/RNA machinery, the same genetic code, ribosomes, and core metabolic pathways in all organisms. The more features and sequences two species share, the more recently they diverged.
Archaeopteryx: transitional fossils link major groups and support common ancestry
Antibiotic sensitivity plate: clear zones show which antibiotics kill the bacteria
Evolution is ongoing and observable: antibiotic-resistant bacteria, pesticide-resistant insects, and rapid changes in fast-breeding species. Because environments keep changing, selection keeps acting – evolution has no endpoint.
How antibiotic resistance spreads through a population by natural selection
7.9.B.2 系统发育树和支序图可根据现存或化石物种的形态相似性,以及 DNA 和蛋白质序列的相似性来构建。
7.9.B.3 系统发育树和支序图是基于证据不断修订的假说。
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A phylogenetic tree 系统发育树 (cladogram) diagrams evolutionary relationships, with branch points marking common ancestors and shared derived traits grouping related species. Trees are hypotheses, revised as new (especially molecular) data arrive.
The tree of life: phylogeny groups organisms by shared ancestry from a common origin
Speciation 物种形成 is the origin of new species, usually when populations become reproductively isolated 生殖隔离 and diverge. Allopatric speciation follows a geographic split; sympatric speciation happens without one. Once populations can no longer interbreed, they are separate species.
Genetic diversity 多样性 helps a population survive change – if conditions shift, some variants may already be suited to them. Low diversity (as in an endangered species) leaves a population vulnerable. Variation arises from mutation and the reshuffling of meiosis and sexual reproduction.
ii. 地球大约形成于 46 亿年前(bya)。在约 39 亿年前之前,环境过于恶劣而不适合生命存在,而最早的生命化石证据可追溯至 35 亿年前。综合这些证据,为生命起源提供了一个合理的时间范围。
7.12.A.2 “RNA世界”假说提出 RNA 可能是最早的遗传物质。该假说包含三个假设:
i. 在某个时间点,通过 RNA 的复制确保了遗传的连续性。
ii. 碱基配对是复制所必需的。
iii. 基因编码的蛋白质未作为催化剂参与其中。
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Evidence suggests early Earth's conditions could form simple organic molecules (the Miller–Urey type experiments), which assembled into polymers, then self-replicating RNA (the "RNA world"), and eventually membrane-bound cells. The first cells were prokaryotes; eukaryotes arose later through endosymbiosis 内共生.
Stromatolites: layered microbial mats are among the oldest evidence of life on EarthA hydrothermal vent: hot chemical-rich water may have powered early metabolism at life's origin
Common mistakes.
Saying organisms evolve a trait because they need it. Variation arises at random by mutation; selection only changes how common existing variants are.
Saying the antibiotic or pesticide causes the resistance mutation. Resistant variants were already present; the chemical kills the others, so the resistant ones leave more offspring.
Reading a cladogram's tip order as relatedness. Relatedness comes from the most recent shared branch point; two tips next to each other are not always closest relatives, and branches can rotate about a node without changing the tree.
Saying humans evolved from chimpanzees. Humans and chimpanzees share a common ancestor; neither species is the ancestor of the other.
Mixing up homologous and analogous structures. Homologous structures share an ancestral origin (human arm, whale flipper); analogous structures 同功结构 do a similar job but evolved separately (bird and insect wings), so only homologous structures show common ancestry.
Using the dominant-phenotype frequency as $p^2$. Dominant phenotype = $p^2+2pq$; always start from the recessive phenotype, $q^2$.
Saying a population in Hardy–Weinberg equilibrium has equal allele frequencies. Equilibrium means the frequencies are not changing between generations, whatever their values.