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Atomic structure

A-Level Chemistry · Topic 1

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1.1

What an atom is made of

Syllabus
  1. understand that atoms are mostly empty space surrounding a very small, dense nucleus that contains protons and neutrons; electrons are found in shells in the empty space around the nucleus
  2. identify and describe protons, neutrons and electrons in terms of their relative charges and relative masses
  3. understand the terms atomic and proton number; mass and nucleon number
  4. describe the distribution of mass and charge within an atom
  5. describe the behaviour of beams of protons, neutrons and electrons moving at the same velocity in an electric field
  6. determine the numbers of protons, neutrons and electrons present in both atoms and ions given atomic or proton number, mass or nucleon number and charge
  7. state and explain qualitatively the variations in atomic radius and ionic radius across a period and down a group

Source: Cambridge International syllabus

A scanning tunnelling microscope image of atoms A scanning tunnelling microscope can image individual atoms.

Everything is made of atoms 原子. An atom is mostly empty space. At its centre is a tiny, heavy nucleus 原子核. The nucleus holds two kinds of particle: protons 质子 and neutrons 中子. Around the nucleus, in the empty space, move the electrons 电子. The electrons stay in shells 壳层 — layers at set distances from the nucleus.

The nucleus is very small but holds almost all the mass. The electrons take up almost all the space but have almost no mass.

An atom with a central nucleus of protons and neutrons, surrounded by electrons in two shells An atom is mostly empty space: protons and neutrons sit in the tiny central nucleus, while electrons move in shells around it

Relative charge and relative mass

We compare the three particles using relative charge 相对电荷 and relative mass 相对质量. These are simple numbers, not real units.

Particle Relative charge Relative mass
proton $+1$ $1$
neutron $0$ $1$
electron $-1$ $\tfrac{1}{1836}$ (about $0$)

A proton and a neutron have almost the same mass. An electron is about 1836 times lighter. The proton is positive, the electron is negative, and the neutron has no charge — it is neutral 中性.

Proton number and nucleon number

Two numbers describe the nucleus:

  • the proton number 质子数 (also called the atomic number 原子序数), symbol $Z$ — the number of protons.
  • the nucleon number 核子数 (also called the mass number 质量数), symbol $A$ — the total number of protons and neutrons. Protons and neutrons are both nucleons 核子.

So the number of neutrons is $A - Z$.

Counting particles in an atom or ion

For a neutral atom, the number of electrons equals the number of protons, which equals $Z$.

An ion 离子 is an atom that has lost or gained electrons, so it has a charge:

  • a positive ion has fewer electrons than protons.
  • a negative ion has more electrons than protons.

Example: $^{27}_{13}\text{Al}^{3+}$ has $13$ protons, $27 - 13 = 14$ neutrons, and $13 - 3 = 10$ electrons (it lost 3 electrons to become $3+$).

How mass and charge are spread out

Almost all the mass sits in the nucleus, because protons and neutrons are heavy and electrons are very light. All the positive charge is in the nucleus (the protons). The negative charge is spread out in the shells (the electrons).

Beams of particles in an electric field

Imagine beams of protons, neutrons and electrons moving at the same speed into an electric field 电场 between two charged plates:

  • the proton beam bends towards the negative plate (protons are positive).
  • the electron beam bends the other way, towards the positive plate. It bends much more, because the electron is far lighter — the same force gives a bigger deflection 偏转 to a smaller mass.
  • the neutron beam goes straight through. It has no charge, so the field gives it no force.

Three beams between charged plates: the electron bends sharply to the positive plate, the proton bends gently to the negative plate, the neutron goes straight In an electric field the proton bends towards the $-$ plate and the electron bends the opposite way and far more (it is much lighter); the neutron passes straight through

Atomic radius and ionic radius

The atomic radius 原子半径 is the size of an atom. The ionic radius 离子半径 is the size of an ion.

Across a period 周期 (left to right), the atomic radius gets smaller. The nuclear charge 核电荷 (the pull from the protons) rises, but the electrons go into the same outer shell, so the shielding 屏蔽 by inner shells stays about the same. The stronger pull draws the outer shell inwards.

Down a group (top to bottom), the atomic radius gets larger. Each step down adds a new shell, so the outer electrons are further out and feel more shielding from the nucleus.

A row of atoms getting smaller across a period, and a column of atoms getting larger down a group Across a period the atoms shrink (stronger nuclear pull on the same outer shell); down a group they grow (each step adds a shell)

For ions:

  • a positive ion (cation 阳离子) is smaller than its atom. It has lost its outer shell, and the electrons that remain feel a stronger pull each.
  • a negative ion (anion 阴离子) is larger than its atom. It has gained electrons, so there is more repulsion 排斥 between the electrons.
  • among ions that have the same number of electrons, the one with more protons is smaller.
Explore

Explore the atom

Tap each part. A tiny dense nucleus of protons and neutrons holds the mass; light electrons orbit it in shells.

Explore

Atomic and ionic radius trends

Atomic radius falls across a period (rising nuclear charge pulls the same shell in) and rises down a group (an extra shell each time). Step across Period 3 to see it.

Vocabulary Train
English Chinese Pinyin
atom 原子 yuán zi
nucleus 原子核 yuán zǐ hé
proton 质子 zhì zi
neutron 中子 zhōng zi
electron 电子 diàn zi
shell 壳层 ké céng
relative charge 相对电荷 xiāng duì diàn hè
relative mass 相对质量 xiāng duì zhì liàng
neutral 中性 zhōng xìng
proton number 质子数 zhì zi shù
atomic number 原子序数 yuán zi xù shù
nucleon number 核子数 hé zǐ shù
mass number 质量数 zhì liàng shù
nucleon 核子 hé zǐ
ion 离子 lí zi
electric field 电场 diàn chǎng
deflection 偏转 piān zhuǎn
atomic radius 原子半径 yuán zi bàn jìng
ionic radius 离子半径 lí zi bàn jìng
period 周期 zhōu qī
nuclear charge 核电荷 hé diàn hè
shielding 屏蔽 píng bì
group
cation 阳离子 yáng lí zi
anion 阴离子 yīn lí zi
repulsion 排斥 pái chì
1.2

Isotopes

Syllabus
  1. define the term isotope in terms of numbers of protons and neutrons
  2. understand the notation $_y^x\text{A}$ for isotopes, where $x$ is the mass or nucleon number and $y$ is the atomic or proton number
  3. state that and explain why isotopes of the same element have the same chemical properties
  4. state that and explain why isotopes of the same element have different physical properties, limited to mass and density

Source: Cambridge International syllabus

Isotopes 同位素 are atoms of the same element with the same number of protons but a different number of neutrons. So isotopes have the same proton number $Z$ but a different nucleon number $A$.

Two chlorine isotopes — both have 17 protons but one has 18 neutrons and the other 20 Two chlorine isotopes: same protons, different neutrons

We write an isotope as $^{A}_{Z}\text{X}$: the nucleon number $A$ on top, the proton number $Z$ below. For example, chlorine has two main isotopes, $^{35}_{17}\text{Cl}$ and $^{37}_{17}\text{Cl}$.

Same chemical properties

Chemical properties 化学性质 depend on the electrons, especially the outer electrons. Isotopes of one element have the same number of electrons arranged in the same way. So they react in exactly the same way — they have the same chemical properties.

Different physical properties

Some physical properties 物理性质 depend on mass, so they differ between isotopes. A heavier isotope has more neutrons, so more mass, and therefore a higher density 密度. (The syllabus limits this difference to mass and density.)

Explore

Isotope lab

Classify isotope facts by what changes and what stays the same.

Vocabulary Train
English Chinese Pinyin
isotope 同位素 tóng wèi sù
chemical properties 化学性质 huà xué xìng zhì
physical properties 物理性质 wù lǐ xìng zhì
density 密度 mì dù
1.3

Electrons, energy levels and orbitals

Syllabus
  1. understand the terms: shells, sub-shells and orbitals; principal quantum number (n); ground state, limited to electronic configuration
  2. describe the number of orbitals making up s, p and d sub-shells, and the number of electrons that can fill s, p and d sub-shells
  3. describe the order of increasing energy of the sub-shells within the first three shells and the 4s and 4p sub-shells
  4. describe the electronic configurations to include the number of electrons in each shell, sub-shell and orbital
  5. explain the electronic configurations in terms of energy of the electrons and inter-electron repulsion
  6. determine the electronic configuration of atoms and ions given the atomic or proton number and charge, using either of the following conventions: e.g. for Fe: $1\text{s}^2 2\text{s}^2 2\text{p}^6 3\text{s}^2 3\text{p}^6 3\text{d}^6 4\text{s}^2$ (full electronic configuration) or [Ar] $3\text{d}^6 4\text{s}^2$ (shorthand electronic configuration)
  7. understand and use the electrons in boxes notation
  8. describe and sketch the shapes of s and p orbitals
  9. describe a free radical as a species with one or more unpaired electrons

Source: Cambridge International syllabus

The visible emission spectrum of hydrogen: four bright lines on black Hydrogen emits light only at discrete, characteristic wavelengths — its line emission spectrum.

Electrons are arranged in shells, sub-shells and orbitals.

Shells and the principal quantum number

Each shell is labelled by the principal quantum number 主量子数 $n = 1, 2, 3, \dots$ A larger $n$ means a shell that is further from the nucleus and higher in energy.

Sub-shells and orbitals

Each shell is split into sub-shells 亚层, named s, p and d. Each sub-shell is built from orbitals 轨道. An orbital is a small region that can hold up to two electrons.

Sub-shell Number of orbitals Maximum electrons
s 1 2
p 3 6
d 5 10

So an s sub-shell holds 2 electrons, a p sub-shell holds 6, and a d sub-shell holds 10.

Order of increasing energy

Electrons fill the lowest-energy sub-shell first. For the first three shells, plus 4s and 4p, the order of rising energy is:

$$1\text{s} < 2\text{s} < 2\text{p} < 3\text{s} < 3\text{p} < 4\text{s} < 3\text{d} < 4\text{p}$$

Notice the surprise: 4s is slightly lower in energy than 3d, so 4s fills first.

An energy-level diagram of the sub-shells from 1s up to 4p, with 4s drawn just below 3d The sub-shells in order of increasing energy. 4s lies just below 3d, so 4s fills first

Electronic configuration

The electronic configuration 电子排布 lists how many electrons are in each sub-shell. The lowest-energy arrangement is the ground state 基态.

For iron (Fe, $Z = 26$):

$$1\text{s}^2\,2\text{s}^2\,2\text{p}^6\,3\text{s}^2\,3\text{p}^6\,3\text{d}^6\,4\text{s}^2$$

You can write a shorthand using the nearest noble gas 稀有气体 in square brackets:

$$[\text{Ar}]\,3\text{d}^6\,4\text{s}^2$$

Here $[\text{Ar}]$ stands for the full configuration of argon.

For ions, you add or remove electrons. One key rule: when a transition metal forms a positive ion, it loses its 4s electrons before its 3d electrons. So $\text{Fe}^{3+}$ is $[\text{Ar}]\,3\text{d}^5$.

Electrons in boxes

The electrons in boxes notation draws each orbital as a box and each electron as an arrow. Two electrons in the same orbital must point opposite ways, because each electron has a property called spin 自旋, and a shared orbital needs opposite spins.

Within a sub-shell, electrons fill empty orbitals one at a time, with parallel arrows, before any orbital gets a second electron. Spreading out like this keeps the electrons apart and lowers the repulsion between them.

Box diagram for nitrogen: filled 1s and 2s boxes with paired opposite arrows, and three 2p boxes each with one upward arrow Electrons in boxes for nitrogen ($1\text{s}^2\,2\text{s}^2\,2\text{p}^3$): paired electrons point opposite ways, and the 2p orbitals fill singly with parallel spins

Why the configuration takes this shape

Electrons fill from low energy to high energy because that gives the most stable (lowest-energy) atom. Within a sub-shell they spread out singly first to reduce the repulsion between the negative electrons.

Shapes of s and p orbitals

  • an s orbital is a sphere 球形 centred on the nucleus.
  • a p orbital has two lobes, like a dumbbell, pointing along one axis. The three p orbitals point along three directions at right angles (the $x$, $y$ and $z$ axes).

On the left a spherical s orbital with the nucleus at its centre; on the right three dumbbell-shaped p orbitals pointing along the x, y and z axes An s orbital is a sphere; each p orbital is a dumbbell, and the three p orbitals point along the $x$, $y$ and $z$ axes

Free radicals

A free radical 自由基 is a species with one or more unpaired electrons 未成对电子. Free radicals are very reactive.

Explore

Filling the electron shells

Change the atomic number Z and watch the electrons fill the shells (2, 8, 8, …) — the pattern that builds the Periodic Table.

Vocabulary Train
English Chinese Pinyin
principal quantum number 主量子数 zhǔ liàng zǐ shù
sub-shell 亚层 yà céng
orbital 轨道 guǐ dào
electronic configuration 电子排布 diàn zi pái bù
ground state 基态 jī tài
noble gas 稀有气体 xī yǒu qì tǐ
spin 自旋 zì xuán
sphere 球形 qiú xíng
free radical 自由基 zì yóu jī
unpaired electrons 未成对电子 wèi chéng duì diàn zi
Exercise sheet
1.4

Ionisation energy

Syllabus
  1. define and use the term first ionisation energy, IE
  2. construct equations to represent first, second and subsequent ionisation energies
  3. identify and explain the trends in ionisation energies across a period and down a group of the Periodic Table
  4. identify and explain the variation in successive ionisation energies of an element
  5. understand that ionisation energies are due to the attraction between the nucleus and the outer electron
  6. explain the factors influencing the ionisation energies of elements in terms of nuclear charge, atomic/ionic radius, shielding by inner shells and sub-shells and spin-pair repulsion
  7. deduce the electronic configurations of elements using successive ionisation energy data
  8. deduce the position of an element in the Periodic Table using successive ionisation energy data

Source: Cambridge International syllabus

First ionisation energy

The first ionisation energy 第一电离能 (IE) is the energy needed to remove one electron from each atom in one mole of gaseous atoms, forming one mole of gaseous $+1$ ions.

We use gaseous atoms so there are no forces between the particles. The unit is $\text{kJ mol}^{-1}$. As an equation, for an element X:

$$\text{X}(\text{g}) \rightarrow \text{X}^{+}(\text{g}) + \text{e}^{-}$$

The $(\text{g})$ shows the species is a gas.

Successive ionisation energies

After removing one electron, you can remove another. The second ionisation energy removes one electron from each $+1$ ion:

$$\text{X}^{+}(\text{g}) \rightarrow \text{X}^{2+}(\text{g}) + \text{e}^{-}$$

You can keep going. These are the successive ionisation energies 逐级电离能. Each is larger than the one before, because every electron is pulled away from a more positive ion.

What ionisation energy depends on

Ionisation energy comes from the attraction between the positive nucleus and the outer electron. Three main factors set how strong that attraction is:

  • nuclear charge: more protons pull the electrons more strongly, so the ionisation energy is higher.
  • atomic radius: the further the outer electron sits from the nucleus, the weaker the pull, so the ionisation energy is lower.
  • shielding: inner shells block some of the pull on the outer electron. More inner shells mean more shielding and a lower ionisation energy.

There is a smaller effect too — spin-pair repulsion 自旋成对排斥. When two electrons share one orbital, they push each other a little, so one is easier to remove.

Trends in first ionisation energy

Across a period, the first ionisation energy generally rises. The nuclear charge grows while shielding stays about the same, so the outer electrons are held more tightly.

Down a group, the first ionisation energy falls. Lower elements have more shells, so more shielding and a larger radius, and the outer electron is easier to remove.

The dips are evidence for sub-shells

The rise across a period is not smooth. Two small dips appear, and you should be able to explain both:

  • Group 2 to Group 13 (for example Mg to Al): the electron removed from Al comes from a 3p sub-shell, which is higher in energy than the full 3s sub-shell in Mg. A 3p electron is easier to remove, so the value dips.
  • Group 15 to Group 16 (for example P to S): in S, one 3p orbital now holds a pair of electrons. Spin-pair repulsion makes one of them easier to remove, so the value dips.

These dips are evidence that sub-shells exist.

A graph of first ionisation energy across Period 3 rising overall but dipping at aluminium and at sulfur First ionisation energy rises across Period 3 but dips at Al and at S — evidence that sub-shells exist

Successive ionisation energies are evidence for shells

If you plot the successive ionisation energies of one element, the values rise, with big jumps at certain points. A big jump happens when the next electron must come from a shell closer to the nucleus.

Count how many electrons come off easily before the first big jump — that is the number of electrons in the outer shell, which tells you the group the element is in. You can also use the pattern to work out the electronic configuration and the position of the element in the Periodic Table.

A log-scale graph of the eleven successive ionisation energies of sodium, with two big jumps splitting the points into groups of 1, 8 and 2 Successive ionisation energies of sodium (log scale): the big jumps reveal the $2,8,1$ shell structure

Electrons removed before the first big jump Group
1 Group 1
2 Group 2
3 Group 13

Worked example. The first five successive ionisation energies of an element are $590$, $1150$, $4940$, $6480$ and $8120\ \text{kJ}\,\text{mol}^{-1}$. Which group is it in? Look for the big jump, not the biggest number. From the 1st to the 2nd the value roughly doubles, which is a normal rise. From the 2nd ($1150$) to the 3rd ($4940$) it more than quadruples: that is the jump. So two electrons come off easily before it, the outer shell holds 2 electrons, and the element is in Group 2. Count the electrons removed before the jump, and explain the jump properly: the next electron is being pulled from a shell closer to the nucleus, not from a different element.

Explore

The ionisation-energy trend — and its dips

First ionisation energy generally rises across a period, but DIPS where a new p sub-shell starts and where a p-orbital pair first forms. Step across to find the two tell-tale dips.

Vocabulary Train
English Chinese Pinyin
first ionisation energy 第一电离能 dì yī diàn lí néng
successive ionisation energies 逐级电离能 zhú jí diàn lí néng
spin-pair repulsion 自旋成对排斥 zì xuán chéng duì pái chì
1.4

Exam tips

  • Define isotopes in full: atoms of the same element with the same number of protons but a different number of neutrons — the mark scheme wants both halves.
  • 4s fills before 3d, but electrons are removed from 4s first when forming ions, so $\text{Fe}^{3+}$ is $[\text{Ar}]3\text{d}^5$ (not $[\text{Ar}]3\text{d}^3 4\text{s}^2$).
  • In successive ionisation energies, a big jump marks the start of a new (inner) shell — use the jumps to place the element in its group.
  • Explain every ionisation-energy trend with the same three factors: nuclear charge, distance and shielding, plus sub-shell effects for the small dips.
  • Learn the exact reason first ionisation energy of oxygen is below nitrogen: oxygen's paired 2p electrons repel, so one is easier to remove.

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